What we do

Supplemental & 
Directed Payments


We help states design, implement, and manage supplemental and directed payment programs that strengthen Medicaid provider reimbursement while ensuring full compliance with federal requirements. Our team supports the development of transparent, data-driven methodologies that maximize available federal financial participation, improve payment accuracy, and align with evolving CMS guidance and state program goals.

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Strengthening Medicaid Financing Through Supplemental & Directed Payments 

Supplemental and directed payment programs are a key part of Medicaid financing, helping states strengthen provider reimbursement, support safety-net providers, and improve access to care for vulnerable populations. They address gaps in base payment methodologies while aligning funding with state policy and delivery system goals.

Programs such as Disproportionate Share Hospital (DSH) payments, Upper Payment Limit (UPL) demonstrations, Medicaid directed payments, and Ground Emergency Medical Transportation (GEMT) programs require complex financial modeling, detailed provider data, and strict compliance with federal requirements. Recent regulatory updates, including Centers for Medicare & Medicaid Services (CMS) final rule CMS-2439-F, have also increased expectations for transparency, documentation, and oversight.

We help state Medicaid agencies design, evaluate, and manage these programs to ensure they are compliant, financially sound, and aligned with long-term program goals, while supporting consistency across fee-for-service and managed care delivery systems.


What We Do 

We provide end-to-end support across the spectrum of supplemental and directed payment programs, combining deep policy expertise, advanced financial modeling, and practical implementation experience. Our services include: 

  • Program design and payment methodology development. 
  • Financial modeling and fiscal impact analysis. 
  • Provider data collection and validation. 
  • Development of preprints and supporting documentation. 
  • Ongoing program monitoring and compliance support.
  • Assistance with review, questions, and approvals by the Centers for Medicare & Medicaid Services (CMS).  

Where We Support Supplemental & Directed Payments

DSH programs are a foundational component of Medicaid financing, supporting hospitals that serve a disproportionate share of low-income and uninsured patients. These programs require precise eligibility determinations, accurate calculation of hospital-specific limits, and alignment with complex federal requirements.

We support state Medicaid agencies across the continuum of DSH programs, including eligibility assessment, payment calculation, methodology design, and compliance with federal audit requirements. Our work reflects unmatched experience in both DSH payment development and federally mandated DSH audits, thus providing a comprehensive perspective that strengthens program integrity and defensibility.

Our DSH services include:

  • DSH eligibility determination and hospital qualification analysis.
  • Development and validation of DSH payment methodologies.
  • Annual DSH payment calculations and modeling.
  • Analysis of hospital-specific limits and uncompensated care costs.
  • Alignment of payment methodologies with federal DSH audit requirements.
  • Evaluation of interactions with UPL programs, waiver-based uncompensated care pools, and other supplemental payments.
  • Support for State Plan Amendments (SPAs) and CMS submissions.

Because we perform DSH audits for a large number of states, we bring a practical understanding of how payment methodologies are evaluated under federal audit rules, helping agencies design programs that are accurate, compliant, and defensible.

UPL programs allow states to make supplemental payments up to the Medicare equivalent of what providers would receive for similar services. These programs require detailed cost and utilization data, as well as careful alignment with federal requirements.

We assist states with:

  • UPL calculation development and validation.
  • Data collection and cost analysis.
  • Program design and documentation.
  • Ongoing monitoring and compliance.

Our approach ensures UPL programs are defensible, transparent, and aligned with broader Medicaid financing strategies.

Directed payment programs allow states to require managed care plans to implement specific payment arrangements that advance delivery system and policy goals. These programs have become increasingly important in supporting provider participation and advancing value-based care. Directed payments are a primary mechanism for aligning reimbursement within managed care delivery systems with broader Medicaid financing and policy goals.

Recent changes under CMS-2439-F have introduced additional requirements related to:

  • Payment design and approval processes.
  • Documentation and reporting expectations.
  • Demonstration of quality and access outcomes.
  • Transparency and accountability.

We help states navigate these evolving requirements by supporting the development, evaluation, and ongoing management of directed payment arrangements that meet federal expectations and achieve program objectives.

GEMT programs provide supplemental reimbursement to eligible providers for the cost of delivering emergency medical transportation services. These programs require detailed cost reporting, certification of public expenditures, and compliance with federal financing rules.

We support GEMT programs through:

  • Cost identification and reporting methodologies.
  • Certified public expenditure (CPE) support.
  • Payment calculation and reconciliation.
  • Program compliance and documentation.

Supplemental and directed payment programs are closely connected to broader Medicaid financing strategies, including base rate setting, cost reporting, and federal financial participation (FFP).

Our team brings an integrated perspective that helps states align these components to:

  • Maximize available federal funding.
  • Ensure consistency across payment methodologies.
  • Maintain compliance with federal requirements.
  • Support long-term financial sustainability.

Supplemental payment programs are subject to increasing federal scrutiny and evolving regulatory expectations. States must ensure that programs are:

  • Properly documented and approved.
  • Supported by accurate and complete data.
  • Aligned with federal rules and guidance.
  • Structured to withstand audit and review.

We help agencies proactively address these challenges through rigorous analysis, clear documentation, and practical implementation strategies.

Managed Care Program Integrity Considerations

Directed payment arrangements within managed care require careful oversight to ensure compliance with federal requirements and alignment between payment methodologies and services delivered.

Trusted Expertise in Medicaid Financing Systems

Strategic Medicaid Financing Expertise

We bring deep, practical experience supporting complex Medicaid financing structures across state programs. Our team helps agencies design, evaluate, and strengthen financing systems that are transparent, compliant, and built to withstand federal scrutiny while supporting long-term program stability.

Experience & Approach 

Our work is grounded in decades of experience supporting Medicaid financing programs across the country. We bring: 

  • Deep knowledge of federal Medicaid policy and financing requirements. 
  • Experience across diverse state programs and delivery systems. 
  • Proven methodologies for complex payment modeling. 
  • An independent and objective perspective. 

We tailor our approach to each state’s goals, program structure, and regulatory environment, delivering solutions that are both effective and sustainable. 

Results & Outcomes 

Our supplemental and directed payment services are designed to support: 

  • Accurate and defensible payment methodologies. 
  • Increased FFP. 
  • Strengthened provider reimbursement and access to care. 
  • Improved transparency and accountability. 
  • Compliance with federal requirements and CMS expectations. 
A Trusted Partner in Medicaid Financing 

Supplemental and directed payments are among the most complex and impactful components of Medicaid financing. We help states navigate this complexity with confidence, designing and managing programs that support providers, comply with evolving requirements, and align with broader health care policy goals.  

The Transformative Power of Partnership

Connect With Our Team

Partner with experts who understand the complexities of health and human services programs. Let us guide your organization through the industry’s unique challenges and opportunities.

Email: tclark@mslc.com
Phone Number: 888-749-5799

In the Words of our Clients…

Myers & Stauffer’s staff are professional, knowledgeable, responsible, accountable, and ensure they are meeting the needs of their clients. 

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